A widespread family of ribosomal peptide metallophores involved in bacterial adaptation to metal stress

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Leprevost, Laura | Jünger, Sophie | Lippens, Guy | Guillaume, Céline | Sicoli, Giuseppe | Oliveira, Lydie | Falcone, Enrico | de Santis, Emiliano | Rivera-Millot, Alex | Billon, Gabriel | Stellato, Francesco | Henry, Céline | Antoine, Rudy | Zirah, Séverine | Dubiley, Svetlana | Li, Yanyan | Jacob-Dubuisson, Françoise

Edité par CCSD ; National Academy of Sciences -

International audience. Ribosomally synthesized and posttranslationally modified peptides (RiPPs) are a structurally diverse group of natural products that bacteria employ in their survival strategies. Herein, we characterized the structure, the biosynthetic pathway, and the mode of action of a RiPP family called bufferins. With thousands of homologous biosynthetic gene clusters throughout the bacterial phylogenetic tree, bufferins form by far the largest family of RiPPs modified by multinuclear nonheme iron-dependent oxidases (MNIO, DUF692 family). Using Caulobacter vibrioides bufferins as a model, we showed that the conserved Cys residues of their precursors are transformed into 5-thiooxazoles, further expanding the reaction range of MNIO enzymes. This rare modification is installed in conjunction with a partner protein of the DUF2063 family. Bufferin precursors are rare examples of bacterial RiPPs found to feature an N-terminal Sec signal peptide allowing them to be exported by the ubiquitous Sec pathway. We reveal that bufferins are involved in copper homeostasis, and their metal-binding propensity requires the thiooxazole heterocycles. Bufferins enhance bacterial growth under copper stress by complexing excess metal ions. Our study thus describes a large family of RiPP metallophores and unveils a widespread but overlooked metal homeostasis mechanism in bacteria.

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