Binding stoichiometry and structural model of the HIV-1 Rev/Importin β complex

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Spittler, Didier | Indorato, Rose-Laure | Erba, Elisabetta Boeri | Delaforge, Elise | Signor, Luca | Harris, Simon | Garcia-Saez, Isabel | Palencia, Andrés | Gabel, Frank | Blackledge, Martin | Noirclerc-Savoye, Marjolaine | Petosa, Carlo

Edité par CCSD -

International audience. ABSTRACT HIV-1 Rev mediates the nuclear export of intron-containing viral RNA transcripts and is essential for viral replication. Rev is imported into the nucleus by the host protein Importin β (Impβ), but how Rev associates with Impβ is poorly understood. Here, we report biochemical, mutational, and biophysical studies of the Impβ/Rev complex. We show that Impβ binds two Rev monomers through independent binding sites, in contrast to the 1:1 binding stoichiometry observed for most Impβ cargos. Peptide scanning data and charge-reversal mutations identify the N-terminal tip of Rev helix α2 within Rev’s arginine-rich motif (ARM) as a primary Impβ-binding epitope. Cross-linking mass spectrometry and compensatory mutagenesis data combined with molecular docking simulations suggest a structural model in which one Rev monomer binds to the C-terminal half of Impβ with Rev helix α2 roughly parallel to the HEAT-repeat superhelical axis, whereas the other monomer binds to the N-terminal half. These findings shed light on the molecular basis of Rev recognition by Impβ and highlight an atypical binding behavior that distinguishes Rev from canonical cellular Impβ cargos.

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