Viromes of one year old infants reveal the impact of birth mode on microbiome diversity

Archive ouverte

Mccann, Angela | Ryan, Feargal, J | Stockdale, Stephen, R | Dalmasso, Marion | Blake, Tony | Ryan, C. Anthony | Stanton, Catherine | Mills, Susan | Ross, Paul | Hill, Colin

Edité par CCSD ; PeerJ -

International audience. Establishing a diverse gut microbiota after birth is being increasingly recognised as important for preventing illnesses later in life. It is well established that bacterial diversity rapidly increases post-partum; however, few studies have examined the infant gut virome/phageome during this developmental period. We performed a metagenomic analysis of 20 infant faecal viromes at one year of age to determine whether spontaneous vaginal delivery (SVD) or caesarean section (CS) influenced viral composition. We find that birth mode results in distinctly different viral communities, with SVD infants having greater viral and bacteriophage diversity. We demonstrate that CrAssphage is acquired early in life, both in this cohort and two others, although no difference in birth mode is detected. A previous study has shown that bacterial OTU's (operational taxonomic units) identified in the same infants could not discriminate between birth mode at 12 months of age. Therefore, our results indicate that vertical transmission of viral communities from mother to child may play a role in shaping the early life microbiome, and that birth mode should be considered when studying the early life gut virome.

Suggestions

Du même auteur

Viral Dark Matter in the Gut Virome of Elderly Humans

Archive ouverte | Stockdale, Stephen, R | CCSD

The human virome is an area of increasing interest with relation to human health and disease. It has been demonstrated to alter in concert with the bacterial microbiome in early life and was also found to be different in patients ...

Reproducible protocols for metagenomic analysis of human faecal phageomes

Archive ouverte | Shkoporov, Andrey, N | CCSD

International audience. Background: Recent studies have demonstrated that the human gut is populated by complex, highly individual and stable communities of viruses, the majority of which are bacteriophages. While d...

Autochthonous faecal virome transplantation (FVT) reshapes the murine microbiome after antibiotic perturbation

Archive ouverte | Draper, Lorraine A. | CCSD

Background It has become increasingly apparent that establishing and maintaining a complex and diverse gut microbiome is fundamental to human health. There are growing efforts to identify methods that can modulate and influence th...

Chargement des enrichissements...