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MAnGO: an interactive R-based tool for two-colour microarray analysis.

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Marisa, Laetitia | Ichanté, Jean-Laurent | Reymond, Nancie | Aggerbeck, Lawrence | Delacroix, Hervé | Mucchielli-Giorgi, Marie-Hélène

Edité par CCSD ; Oxford University Press (OUP) -

SUMMARY: MAnGO (Microarray Analysis at the Gif/Orsay platform) is an interactive R-based tool for the analysis of two-colour microarray experiments. It is a compilation of various methods, which allows the user (1) to control data quality by detecting biases with a large number of visual representations, (2) to pre-process data (filtering and normalisation) and (3) to carry out differential analyses. MAnGO is not only a "turn-key" tool, oriented towards biologists but also a flexible and adaptable R script oriented towards bioinformaticians. AVAILABILITY: http://bioinfome.cgm.cnrs-gif.fr/

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