Human SNORA31 variations impair cortical neuron-intrinsic immunity to HSV-1 and underlie herpes simplex encephalitis

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Lafaille, Fabien | Harschnitz, Oliver | Lee, Yoon Seung | Zhang, Peng | Hasek, Mary | Kerner, Gaspard | Itan, Yuval | Ewaleifoh, Osefame | Rapaport, Franck | Carlile, Thomas | Carter-Timofte, Madalina | Paquet, Dominik | Dobbs, Kerry | Zimmer, Bastian | Gao, Daxing | Rojas-Duran, Maria | Kwart, Dylan | Rattina, Vimel | Ciancanelli, Michael | Mcalpine, Jessica | Lorenzo, Lazaro | Boucherit, Soraya | Rozenberg, Flore | Halwani, Rabih | Henry, Benoît | Amenzoui, Naima | Alsum, Zobaida | Marqués, Laura | Church, Joseph | Al-Muhsen, Saleh | Tardieu, Marc | Bousfiha, Ahmed Aziz | Paludan, Søren | Mogensen, Trine Hyrup | Quintana-Murci, Lluis | Tessier-Lavigne, Marc | Smith, Gregory | Notarangelo, Luigi | Studer, Lorenz | Gilbert, Wendy | Abel, Laurent | Casanova, Jean-Laurent | Zhang, Shen-Ying

Edité par CCSD ; Nature Publishing Group -

International audience. Herpes simplex virus-1 (HSV-1) encephalitis (HSE) is typically sporadic. Inborn errors of TLR3- and DBR1-mediated central nervous system cell-intrinsic immunity can account for forebrain and brainstem HSE, respectively. We report five unrelated patients with forebrain HSE, each heterozygous for one of four rare variants of SNORA31, encoding a small nucleolar RNA of the H/ACA class that are predicted to direct the isomerization of uridine residues to pseudouridine in small nuclear RNA and ribosomal RNA. We show that CRISPR/Cas9-introduced bi- and monoallelic SNORA31 deletions render human pluripotent stem cell (hPSC)-derived cortical neurons susceptible to HSV-1. Accordingly, SNORA31-mutated patient hPSC-derived cortical neurons are susceptible to HSV-1, like those from TLR3- or STAT1-deficient patients. Exogenous interferon (IFN)-β renders SNORA31- and TLR3- but not STAT1-mutated neurons resistant to HSV-1. Finally, transcriptome analysis of SNORA31-mutated neurons revealed normal responses to TLR3 and IFN-α/β stimulation but abnormal responses to HSV-1. Human SNORA31 thus controls central nervous system neuron-intrinsic immunity to HSV-1 by a distinctive mechanism.

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