Structural mapping of GABRB3 variants reveals genotype-phenotype correlations

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Johannesen, K. M. | Iqbal, S. | Guazzi, M. | Mohammadi, N. A. | Perez-Palma, E. | Schaefer, E. | de Saint Martin, A. | Abiwarde, M. T. | Mctague, A. | Pons, R. | Piton, A. | Kurian, M. A. | Ambegaonkar, G. | Firth, H. | Sanchis-Juan, A. | Deprez, M. | Jansen, K. | de Waele, L. | Briltra, E. H. | Verbeek, N. E. | van Kempen, M. | Fazeli, W. | Striano, P. | Zara, F. | Visser, G. | Braakman, H. M. H. | Haeusler, M. | Elbracht, M. | Vaher, U. | Smol, Thomas | Lemke, J. R. | Platzer, K. | Kennedy, J. | Klein, K. M. | Au, P. Y. B. | Smyth, K. | Kaplan, J. | Thomas, M. | Dewenter, M. K. | Dinopoulos, A. | Campbell, A. J. | Lal, D. | Lederer, D. | Liao, V. W. Y. | Ahring, P. K. | Moller, R. S. | Gardella, E.

Edité par CCSD ; Nature Publishing Group -

International audience. PurposePathogenic variants in GABRB3 have been associated with a spectrum of phenotypes from severe developmental disorders and epileptic encephalopathies to milder epilepsy syndromes and mild intellectual disability (ID). In this study, we analyzed a large cohort of individuals with GABRB3 variants to deepen the phenotypic understanding and investigate genotype–phenotype correlations.MethodsThrough an international collaboration, we analyzed electro-clinical data of unpublished individuals with variants in GABRB3, and we reviewed previously published cases. All missense variants were mapped onto the 3-dimensional structure of the GABRB3 subunit, and clinical phenotypes associated with the different key structural domains were investigated.ResultsWe characterized 71 individuals with GABRB3 variants, including 22 novel subjects, expressing a wide spectrum of phenotypes. Interestingly, phenotypes correlated with structural locations of the variants. Generalized epilepsy, with a median age at onset of 12 months, and mild-to-moderate ID were associated with variants in the extracellular domain. Focal epilepsy with earlier onset (median: age 4 months) and severe ID were associated with variants in both the pore-lining helical transmembrane domain and the extracellular domain.ConclusionThese genotype–phenotype correlations will aid the genetic counseling and treatment of individuals affected by GABRB3-related disorders. Future studies may reveal whether functional differences underlie the phenotypic differences.

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