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MetExplore: collaborative edition and exploration of metabolic networks

Archive ouverte | Cottret, Ludovic | CCSD

Metabolism of an organism is composed of hundreds to thousands of interconnected biochemical reactions responding to environmental or genetic constraints. This metabolic network provides a rich knowledge to contextualize omics dat...

A computational solution to automatically map metabolite libraries in the context of genome scale metabolic networks

Archive ouverte | Merlet, Benjamin | CCSD

International audience. This article describes a generic programmatic method for mapping chemical compound libraries on organism-specific metabolic networks from various databases (KEGG, BioCyc) and flat file format...

MetaboRank: network-based recommendation system to interpret and enrich metabolomics results

Archive ouverte | Frainay, Clément | CCSD

International audience. Metabolomics has shown great potential to improve the understanding of complex diseases, potentially leading to therapeutic target identification. However, no single analytical method allows ...

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