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Two-dimensional segmentation for analyzing HiC data

Archive ouverte | Levy Leduc, Celine | CCSD

Conference: 13th European Conference on Computational Biology (ECCB)Location: Strasbourg, FRANCEDate: SEP 07-10, 2014Sponsor(s):BioBase; Sbv IMPROVER; Koriscale; Totalinux; Genom, Proteom & Bioinformat. Motivation: ...

Estimating the number of block boundaries from diagonal blockwise matrices without penalization

Archive ouverte | Brault, Vincent | CCSD

In computational biology, numerous recent studies have been dedicated to the analysis of the chromatin structure within the cell by two-dimensional segmentation methods. Motivated by this application, we consider the problem of re...

A variable selection approach in the multivariate linear model: an application to LC-MS metabolomics data

Archive ouverte | Perrot-Dockes, Marie | CCSD

Omic data are characterized by the presence of strong dependence structures that result either from data acquisition or from some underlying biological processes. Applying statistical procedures that do not adjust the variable sel...

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