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Bioinformatics matters: The accuracy of plant and soil fungal community data is highly dependent on the metabarcoding pipeline

Archive ouverte | Pauvert, Charlie | CCSD

International audience. Fungal communities associated with plants and soil influence plant fitness and ecosystem functioning. They are frequently studied by metabarcoding approaches targeting the ribosomal internal ...

Microbial metacommunity: a METABAR coding approach

Archive ouverte | Buée, Marc | CCSD

Microbial metacommunity: a METABAR coding approach. 2017 Scientific MEM days: Journées scientifiques MEM (Métaomiques et écosystèmes microbiens)

Analysis of fungal communities associated with grapevine wood diseases, based on fungal ITS pyrosequencing.

Archive ouverte | Lapalu, Nicolas | CCSD

The Grapevine Trunk Diseases (GTDs) are the most common diseases of grapevine wood inducing a slow decay leading to plant death. Due to the environmental impact, chemical treatments are no longer authorized, and prevention or trun...

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