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Quality Control of Genotypes Using Heritability Estimates of Gene Content at the Marker

Archive ouverte | Forneris, N.S. | CCSD

International audience. Quality control filtering of single-nucleotide polymorphisms (SNPs) is a key step when analyzing genomic data. Here we present a practical method to identify low-quality SNPs, meaning markers...

A comparison of methods to estimate genomic relationships using pedigree and markers in livestock populations

Archive ouverte | Forneris, N.S. | CCSD

International audience. Accurate prediction of breeding values depends on capturing the variability in genome sharing of relatives with the same pedigree relationship. Here, we compare two approaches to set up genom...

Estimates of the actual relationship between half-sibs in a pig population

Archive ouverte | García-Baccino, C.A. | CCSD

Genomic relationships based on markers capture the actual instead of the expected (based on pedigree) proportion of genome shared identical by descent (IBD). Several methods exist to estimate genomic relationships. In this researc...

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