Comparative study of fully three-dimensional reconstruction algorithms for lens-free microscopy

Archive ouverte

Berdeu, Anthony | Momey, Fabien | Laperrousaz, Bastien | Bordy, Thomas | Gidrol, Xavier | Dinten, J.-M. | Picollet-D 'Hahan, Nathalie | Allier, Cédric

Edité par CCSD ; Optical Society of America -

International audience. We propose a three-dimensional (3D) imaging platform based on lens-free microscopy to perform multiangle acquisitions on 3D cell cultures embedded in extracellular matrices. Lens-free microscopy acquisitions present some inherent issues such as the lack of phase information on the sensor plane and a limited angular coverage. We developed and compared three different algorithms based on the Fourier diffraction theorem to obtain fully 3D reconstructions. These algorithms present an increasing complexity associated with a better reconstruction quality. Two of them are based on a regularized inverse problem approach. To compare the reconstruction methods in terms of artefact reduction, signal-to-noise ratio, and computation time, we tested them on two experimental datasets: an endothelial cell culture and a prostate cell culture grown in a 3D extracellular matrix with large reconstructed volumes up to ∼5  mm3∼5  mm3 with a resolution sufficient to resolve isolated single cells. The lens-free reconstructions compare well with standard microscopy.

Suggestions

Du même auteur

3D+time acquisitions of 3D cell culture by means of lens-free tomographic microscopy

Archive ouverte | Berdeu, Anthony | CCSD

Editors: Thomas G. Brown, Carol J. Cogswell, Tony Wilson. International audience. We propose a three-dimensional (3D) imaging platform based on lens-free microscopy to perform multi-angle acquisitions on 3D cell cul...

Lens-free microscopy for 3D + time acquisitions of 3D cell culture

Archive ouverte | Berdeu, Anthony | CCSD

International audience. Thanks to a novel three-dimensional imaging platform based on lens-free microscopy, it is possible to perform multi-angle acquisitions and holographic reconstructions of 3D cell cultures dire...

Culture Conditions can Counterbalance the Thermosensitive Properties of Poly (N-Isopropylacrylamide) during Cell Harvesting

Archive ouverte | Vinjimore, Abeille | CCSD

International audience

Chargement des enrichissements...