Human genetic and immunological determinants of critical COVID-19 pneumonia
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Zhang, Qian | Bastard, Paul | Karbuz, Adem | Gervais, Adrian | Tayoun, Ahmad, Abou | Aiuti, Alessandro | Belot, Alexandre | Bolze, Alexandre | Gaudet, Alexandre | Bondarenko, Anastasiia | Liu, Zhiyong | Spaan, András, N | Guennoun, Andrea | Arias, Andres, Augusto | Planas, Anna, M | Sediva, Anna | Shcherbina, Anna | Neehus, Anna-Lena | Puel, Anne | Froidure, Antoine | Novelli, Antonio | Parlakay, Aslınur, Özkaya | Pujol, Aurora | Yahşi, Aysun | Gülhan, Belgin | Bigio, Benedetta | Boisson, Bertrand | Drolet, Beth, A | Franco, Carlos, Andres Arango | Flores, Carlos | Rodríguez-Gallego, Carlos | Prando, Carolina | Biggs, Catherine, M | Luyt, Charles-Edouard | Dalgard, Clifton, L | O’farrelly, Cliona | Matuozzo, Daniela | Dalmau, David | Perlin, David, S | Mansouri, Davood | van de Beek, Diederik | Vinh, Donald, C | Dominguez-Garrido, Elena | Hsieh, Elena, W Y | Erdeniz, Emine, Hafize | Jouanguy, Emmanuelle | Şevketoglu, Esra | Talouarn, Estelle | Quiros-Roldan, Eugenia | Andreakos, Evangelos | Husebye, Eystein | Alsohime, Fahad | Haerynck, Filomeen | Casari, Giorgio | Novelli, Giuseppe | Aytekin, Gökhan | Morelle, Guillaume | Alkan, Gulsum | Bayhan, Gulsum, Iclal | Feldman, Hagit, Baris | Su, Helen, C | von Bernuth, Horst | Resnick, Igor | Bustos, Ingrid | Meyts, Isabelle | Migeotte, Isabelle | Tancevski, Ivan | Bustamante, Jacinta | Fellay, Jacques | El Baghdadi, Jamila | Martinez-Picado, Javier | Casanova, Jean-Laurent | Rosain, Jeremie | Manry, Jeremy | Chen, Jie | Christodoulou, John | Bohlen, Jonathan | Franco, José, Luis | Li, Juan | Anaya, Juan, Manuel | Rojas, Julian | Ye, Junqiang | Uddin, K, M Furkan | Yasar, Kadriye, Kart | Kisand, Kai | Okamoto, Keisuke | Chaïbi, Khalil | Mironska, Kristina | Maródi, László | Abel, Laurent | Renia, Laurent | Lorenzo, Lazaro | Hammarström, Lennart | Ng, Lisa, F P | Quintana-Murci, Lluis | Erazo, Lucia, Victoria | Notarangelo, Luigi, D | Reyes, Luis, Felipe | Allende, Luis, M | Imberti, Luisa | Renkilaraj, Majistor, Raj Luxman Maglorius | Moncada-Velez, Marcela | Materna, Marie | Anderson, Mark, S | Gut, Marta | Chbihi, Marwa | Ogishi, Masato | Emiroglu, Melike | Seppänen, Mikko, R J | Uddin, Mohammed, J | Shahrooei, Mohammed | Alexander, Natalie | Hatipoglu, Nevin | Marr, Nico | Akçay, Nihal | Boyarchuk, Oksana | Slaby, Ondrej | Akcan, Ozge, Metin | Zhang, Peng | Soler-Palacín, Pere | Gregersen, Peter, K | Brodin, Petter | Garçon, Pierre | Morange, Pierre-Emmanuel | Pan-Hammarström, Qiang | Zhou, Qinhua | Philippot, Quentin | Halwani, Rabih | de Diego, Rebeca, Perez | Levy, Romain | Yang, Rui | Öz, Şadiye, Kübra Tüter | Muhsen, Saleh, Al | Kanık-Yüksek, Saliha | Espinosa-Padilla, Sara | Ramaswamy, Sathishkumar | Okada, Satoshi | Bozdemir, Sefika, Elmas | Aytekin, Selma, Erol | Karabela, Şemsi, Nur | Keles, Sevgi | Senoglu, Sevtap | Zhang, Shen-Ying | Duvlis, Sotirija | Constantinescu, Stefan, N | Boisson-Dupuis, Stephanie | Turvey, Stuart, E | Tangye, Stuart, G | Asano, Takaki | Ozcelik, Tayfun | Le Voyer, Tom | Maniatis, Tom | Morio, Tomohiro | Mogensen, Trine, H | Sancho-Shimizu, Vanessa | Beziat, Vivien | Solanich, Xavier | Bryceson, Yenan | Lau, Yu-Lung | Itan, Yuval | Cobat, Aurélie
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SARS-CoV-2 infection is benign in most individuals but, in ~10% of cases, it triggers hypoxemic COVID-19 pneumonia, which becomes critical in ~3% of cases. The ensuing risk of death (~1%) doubles every five years from childhood onward and is ~1.5 times greater in men than in women. What are the molecular and cellular determinants of critical COVID-19 pneumonia? Inborn errors of type I IFNs, including autosomal TLR3 and X-linked TLR7 deficiencies, are found in ~1-5% of patients with critical pneumonia under 60 years old, and a lower proportion in older patients. Pre-existing autoantibodies neutralizing IFN-α, -β, and/or -ω, which are more common in men than in women, are found in ~15-20% of patients with critical pneumonia over 70 years old, and a lower proportion in younger patients. Thus, at least 15% of cases of critical COVID-19 pneumonia can apparently be explained. The TLR3-and TLR7-dependent production of type I IFNs by respiratory epithelial cells and plasmacytoid dendritic cells, respectively, is essential for host defense against SARS-CoV-2. In ways that can depend on age and sex, insufficient type I IFN immunity in the respiratory tract during the first few days of infection may account for the spread of the virus, leading to pulmonary and systemic inflammation.