Sequence-based genome-wide association studies reveal the polygenic architecture of Varroa destructor resistance in Western honey bees Apis mellifera

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Eynard, Sonia, E | Mondet, Fanny | Basso, Benjamin, B. | Bouchez, Olivier | Bulach, Tabatha | Le Conte, Yves | Dainat, Benjamin | Decourtye, Axel | Genestout, Lucie | Guichard, Matthieu | Guillaume, François | Labarthe, Emmanuelle | Locke, Barbara | Mahla, Rachid | de Miranda, Joachim | Neuditschko, Markus | Phocas, Florence | Poquet, Yannick | Sann, Christina | Serre, Rémi-Félix | Canale Tabet, Kamila | Vignal, Alain | Servin, Bertrand

Edité par CCSD ; Recherche Data Gouv -

Dataset. This repository contains data linked to the publication: Sequence-based genome-wide association studies reveal the polygenic architecture of Varroa destructor resistance in Western honey bees Apis mellifera by SE Eynard, F Mondet, B Basso, O Bouchez, T Bulach, Y Le Conte, B Dainat, A Decourtye, L Genestout, M Guichard, F Guillaume, E Labarthe, B Locke, R Mahla, J de Miranda, M Neuditschko, F Phocas, Y Poquet, C Sann, RF Serre, K Tabet, A Vignal and B Servin [Preprint] (2024). https://doi.org/10.1101/2024.02.16.580755. It includes a file summarising the sequence availability on SRA, the phenotypes, the 'count' files produced using popoolation 2 from mpileup files, the summary statistics from the GWAS analysis performed for a unique population and phenotype using GEMMA and the fixed version, 15/03/2024, of the scripts available on GitHub (https://github.com/seynard/gwas_beestrong)

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