Primary and promiscuous functions coexist during evolutionary innovation through whole protein domain acquisitions

Archive ouverte

Escudero, José Antonio | Nivina, Aleksandra | Kemble, Harry | Loot, Céline | Tenaillon, Olivier | Mazel, Didier

Edité par CCSD ; eLife Sciences Publication -

International audience. Molecular examples of evolutionary innovation are scarce and generally involve point mutations. Innovation can occur through larger rearrangements, but here experimental data is extremely limited. Integron integrases innovated from double-strand- towards single-strand-DNA recombination through the acquisition of the I2 a-helix. To investigate how this transition was possible, we have evolved integrase IntI1 to what should correspond to an early innovation state by selecting for its ancestral activity. Using synonymous alleles to enlarge sequence space exploration, we have retrieved 13 mutations affecting both I2 and the multimerization domains of IntI1. We circumvented epistasis constraints among them using a combinatorial library that revealed their individual and collective fitness effects. We obtained up to 104-fold increases in ancestral activity with various asymmetrical trade-offs in single-strand-DNA recombination. We show that high levels of primary and promiscuous functions could have initially coexisted following I2 acquisition, paving the way for a gradual evolution towards innovation.

Suggestions

Du même auteur

The Integron: Adaptation On Demand.

Archive ouverte | Escudero, José Antonio | CCSD

International audience. The integron is a powerful system which, by capturing, stockpiling, and rearranging new functions carried by gene encoding cassettes, confers upon bacteria a rapid adaptation capability in ch...

Integron Identification in Bacterial Genomes and Cassette Recombination Assays

Archive ouverte | Vit, Claire | CCSD

International audience

The integron integrase efficiently prevents the melting effect of Escherichia coli single-stranded DNA-binding protein on folded attC sites.

Archive ouverte | Loot, Céline | CCSD

International audience. Integrons play a major role in the dissemination of antibiotic resistance genes among bacteria. Rearrangement of gene cassettes occurs by recombination between attI and attC sites, catalyzed ...

Chargement des enrichissements...