Syracuse

RNAspace: an integrated environment for the prediction, annotation and analysis of non-coding RNA

Archive ouverte

Cros, Marie-Josée | de Monte, Antoine | Mariette, Jérôme, J. | Bardou, Philippe | Gautheret, Daniel | Touzet, Hélène | Gaspin, Christine

Edité par CCSD -

National audience. RNAspace is an environment that allows to create web sites dedicated to nonprotein- coding RNA (ncRNA) prediction, annotation and analysis. The web sites allow users to run a variety of tools in an integrated and flexible way. RNAspace is focused on the integration of complementary ncRNA gene finders. It also offers a set of tools for the comparison, visualization, edition and export of ncRNAs candidates. Predictions can be filtered according to a large set of characteristics. A public web site http://rnaspace.org has been created that allows for on line annotation of a complete bacterial genome or a small eukaryotic chromosome.

• Description
• Sujet/Public
• Outil
• Outil d'anticipation
• Mémoire et thèse
• Gestion