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NOBLAST and JAMBLAST: New Options for BLAST and a Java Application Manager for BLAST results

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Lagnel, Jacques | Tsigenopoulos, Costas S. | Iliopoulos, Ioannis

Edité par CCSD ; Oxford University Press (OUP) -

International audience. NOBLAST (New Options for BLAST) is an open source program that provides a new user-friendly tabular output format for various NCBI BLAST programs (Blastn, Blastp, Blastx, Tblastn, Tblastx, Mega BLAST and Psi BLAST) without any use of a parser and provides E-value correction in case of use of segmented BLAST database. JAMBLAST using the NOBLAST output allows the user to manage, view and filter the BLAST hits using a number of selection criteria.

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