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Analysis of a spatial gene expression database for sea anemone Nematostella vectensis during early development

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Botman, Daniel | Jansson, Fredrik | Röttinger, Eric | Martindale, Mark, Q | de Jong, Johann | Kaandorp, Jaap

Edité par CCSD ; BioMed Central -

International audience. The spatial distribution of many genes has been visualized during the embryonic development in the starlet sea anemone Nematostella vectensis in the last decade. In situ hybridization images are available in the Kahi Kai gene expression database, and a method has been developed to quantify spatial gene expression patterns of N. vectensis. In this paper, gene expression quantification is performed on a wide range of gene expression patterns from this database and descriptions of observed expression domains are stored in a separate database for further analysis.

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