Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing

Archive ouverte

Flissi, Areski | Dufresne, Yoann | Michalik, Juraj | Tonon, Laurie | Janot, Stéphane | Noé, Laurent | Jacques, Philippe | Leclère, Valérie | Pupin, Maude

Edité par CCSD ; Oxford University Press -

International audience. Since its creation in 2006, Norine remains the unique knowledgebase dedicated to non-ribosomal pep-tides (NRPs). These secondary metabolites, produced by bacteria and fungi, harbor diverse interesting biological activities (such as antibiotic, anti-tumor, siderophore or surfactant) directly related to the diversity of their structures. The Norine team goal is to collect the NRPs and provide tools to analyze them efficiently. We have developed a user-friendly interface and dedicated tools to provide a complete bioinformatics platform. The knowledgebase gathers abundant and valuable annotations on more than 1100 NRPs. To increase the quantity of described NRPs and improve the quality of associated annotations , we are now opening Norine to crowdsourc-ing. We believe that contributors from the scientific community are the best experts to annotate the NRPs they work on. We have developed MyNorine to facilitate the submission of new NRPs or modifications of stored ones. This article presents MyNorine and other novelties of Norine interface released since the first publication. Norine is freely accessible from the following URL: http://bioinfo.lifl.fr/NRP.

Suggestions

Du même auteur

Norine: update of the nonribosomal peptide resource

Archive ouverte | Flissi, Areski | CCSD

International audience. Norine, the unique resource dedicated to nonribo-somal peptides (NRPs), is now updated with a new pipeline to automate massive sourcing and enhance annotation. External databases are mined to...

Norine, Florine, s2m : powerful bioinformatics resource and tools for the discovery of novel nonribosomal peptides, natural metabolites with versatile activities

Archive ouverte | Esmaeel, Qassim | CCSD

International audience. NonRibosomal peptides (NRPs) are a huge untapped resource of natural products displaying activities with applications in health (i.e. antibiotics) or in biocontrol (especially siderophores an...

Non Ribosomal Peptides : A monomeric puzzle

Archive ouverte | Dufresne, Yoann | CCSD

National audience. Nonribosomal peptides (NRPs) are increasingly studied because they harbor activities which can be exploited in various domains. They are often denoted as graphs illustrating their chemical structu...

Chargement des enrichissements...